Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.46■□□□□ 0.55
Suds3Q8BR65 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.46■□□□□ 0.55
Suds3Q8BR65 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.46■□□□□ 0.55
Suds3Q8BR65 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Suds3Q8BR65 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Suds3Q8BR65 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Suds3Q8BR65 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.44■□□□□ 0.54
Suds3Q8BR65 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Gm5408-201ENSMUST00000197998 747 ntBASIC18.44■□□□□ 0.54
Suds3Q8BR65 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Suds3Q8BR65 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.43■□□□□ 0.54
Suds3Q8BR65 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Suds3Q8BR65 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Suds3Q8BR65 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.42■□□□□ 0.54
Suds3Q8BR65 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Gm27011-201ENSMUST00000182352 972 ntBASIC18.42■□□□□ 0.54
Suds3Q8BR65 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Suds3Q8BR65 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.42■□□□□ 0.54
Suds3Q8BR65 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.41■□□□□ 0.54
Suds3Q8BR65 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Suds3Q8BR65 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.41■□□□□ 0.54
Suds3Q8BR65 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Suds3Q8BR65 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms