Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sfr1Q8BP27 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Flg-201ENSMUST00000050758 1488 ntBASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Gm12527-201ENSMUST00000117967 564 ntBASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Gm12896-201ENSMUST00000118430 226 ntBASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sfr1Q8BP27 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sfr1Q8BP27 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sfr1Q8BP27 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sfr1Q8BP27 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Dio3-201ENSMUST00000097228 1449 ntBASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.26■□□□□ 0.51
Sfr1Q8BP27 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sfr1Q8BP27 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sfr1Q8BP27 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sfr1Q8BP27 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sfr1Q8BP27 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.23■□□□□ 0.51
Sfr1Q8BP27 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sfr1Q8BP27 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sfr1Q8BP27 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms