Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.04■□□□□ 0.32
Ckap4Q8BMK4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Gm15039-201ENSMUST00000118914 875 ntBASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ckap4Q8BMK4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ckap4Q8BMK4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ckap4Q8BMK4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ckap4Q8BMK4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Gm13146-201ENSMUST00000118508 780 ntBASIC17■□□□□ 0.31
Ckap4Q8BMK4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ckap4Q8BMK4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms