Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdh20Q8BIZ0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdh20Q8BIZ0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Nespas-201ENSMUST00000143738 1083 ntBASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Fst-202ENSMUST00000223640 2612 ntBASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdh20Q8BIZ0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdh20Q8BIZ0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdh20Q8BIZ0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh20Q8BIZ0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdh20Q8BIZ0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdh20Q8BIZ0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh20Q8BIZ0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh20Q8BIZ0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms