Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc5a7Q8BGY9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.8■□□□□ 0.12
Slc5a7Q8BGY9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc5a7Q8BGY9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc5a7Q8BGY9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Spcs1-204ENSMUST00000226782 949 ntBASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc5a7Q8BGY9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc5a7Q8BGY9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc5a7Q8BGY9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc5a7Q8BGY9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc5a7Q8BGY9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc5a7Q8BGY9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc5a7Q8BGY9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc5a7Q8BGY9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.74■□□□□ 0.11
Slc5a7Q8BGY9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms