Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptlc3Q8BG54 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sptlc3Q8BG54 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sptlc3Q8BG54 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptlc3Q8BG54 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sptlc3Q8BG54 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Fst-202ENSMUST00000223640 2612 ntBASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sptlc3Q8BG54 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sptlc3Q8BG54 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sptlc3Q8BG54 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.48■■□□□ 1.03
Sptlc3Q8BG54 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms