Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.72■□□□□ 0.43
Ubp1Q811S7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubp1Q811S7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.71■□□□□ 0.43
Ubp1Q811S7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubp1Q811S7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubp1Q811S7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ubp1Q811S7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.69■□□□□ 0.42
Ubp1Q811S7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.69■□□□□ 0.42
Ubp1Q811S7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.69■□□□□ 0.42
Ubp1Q811S7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ubp1Q811S7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ubp1Q811S7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ubp1Q811S7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.67■□□□□ 0.42
Ubp1Q811S7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms