Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim50Q810I2 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.55■□□□□ 0.4
Trim50Q810I2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim50Q810I2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Gm5408-201ENSMUST00000197998 747 ntBASIC17.55■□□□□ 0.4
Trim50Q810I2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim50Q810I2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim50Q810I2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.54■□□□□ 0.4
Trim50Q810I2 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.54■□□□□ 0.4
Trim50Q810I2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim50Q810I2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trim50Q810I2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim50Q810I2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim50Q810I2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.53■□□□□ 0.4
Trim50Q810I2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim50Q810I2 Gm44549-201ENSMUST00000208351 577 ntBASIC17.53■□□□□ 0.4
Trim50Q810I2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim50Q810I2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.52■□□□□ 0.4
Trim50Q810I2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.52■□□□□ 0.4
Trim50Q810I2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim50Q810I2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim50Q810I2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim50Q810I2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trim50Q810I2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Trim50Q810I2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim50Q810I2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim50Q810I2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim50Q810I2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim50Q810I2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim50Q810I2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim50Q810I2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.51■□□□□ 0.39
Trim50Q810I2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim50Q810I2 Tgds-204ENSMUST00000228543 1594 ntBASIC17.51■□□□□ 0.39
Trim50Q810I2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim50Q810I2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim50Q810I2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.51■□□□□ 0.39
Trim50Q810I2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trim50Q810I2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trim50Q810I2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trim50Q810I2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim50Q810I2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.5■□□□□ 0.39
Trim50Q810I2 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.5■□□□□ 0.39
Trim50Q810I2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim50Q810I2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim50Q810I2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim50Q810I2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms