Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Gm34272-201ENSMUST00000208886 253 ntBASIC17.82■□□□□ 0.44
Skida1Q80YR3 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Skida1Q80YR3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.81■□□□□ 0.44
Skida1Q80YR3 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.81■□□□□ 0.44
Skida1Q80YR3 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.81■□□□□ 0.44
Skida1Q80YR3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Gm37660-201ENSMUST00000192754 1732 ntBASIC17.81■□□□□ 0.44
Skida1Q80YR3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Skida1Q80YR3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.8■□□□□ 0.44
Skida1Q80YR3 AC132433.1-201ENSMUST00000221553 1101 ntBASIC17.8■□□□□ 0.44
Skida1Q80YR3 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.8■□□□□ 0.44
Skida1Q80YR3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
Skida1Q80YR3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Gm28359-201ENSMUST00000187470 1322 ntBASIC17.79■□□□□ 0.44
Skida1Q80YR3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Skida1Q80YR3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Skida1Q80YR3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.79■□□□□ 0.44
Skida1Q80YR3 AC154848.1-201ENSMUST00000225451 846 ntBASIC17.79■□□□□ 0.44
Skida1Q80YR3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Skida1Q80YR3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.78■□□□□ 0.44
Skida1Q80YR3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.78■□□□□ 0.44
Skida1Q80YR3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Skida1Q80YR3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms