Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan18Q80WR1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan18Q80WR1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan18Q80WR1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tspan18Q80WR1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Tspan18Q80WR1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tspan18Q80WR1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tspan18Q80WR1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tspan18Q80WR1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan18Q80WR1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan18Q80WR1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Mir5122-201ENSMUST00000175004 89 ntBASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Gm21814-202ENSMUST00000203277 873 ntBASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Gm29791-202ENSMUST00000207888 369 ntBASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Odf3b-204ENSMUST00000227834 930 ntBASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan18Q80WR1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms