Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tnrc18Q80WC3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc18Q80WC3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc18Q80WC3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tnrc18Q80WC3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnrc18Q80WC3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Gm27357-201ENSMUST00000183754 135 ntBASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnrc18Q80WC3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Tnrc18Q80WC3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Gm17808-201ENSMUST00000200859 894 ntBASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnrc18Q80WC3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.02■□□□□ 0.47
Tnrc18Q80WC3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnrc18Q80WC3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnrc18Q80WC3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 AW822252-206ENSMUST00000208904 237 ntBASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Gm18958-201ENSMUST00000174258 762 ntBASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.01■□□□□ 0.47
Tnrc18Q80WC3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18■□□□□ 0.47
Tnrc18Q80WC3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnrc18Q80WC3 Gm27389-201ENSMUST00000183622 195 ntBASIC18■□□□□ 0.47
Tnrc18Q80WC3 Mir1668-201ENSMUST00000184114 107 ntBASIC18■□□□□ 0.47
Tnrc18Q80WC3 Mzt1-203ENSMUST00000227948 952 ntBASIC18■□□□□ 0.47
Tnrc18Q80WC3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Gm24589-201ENSMUST00000116692 94 ntBASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Gm27459-201ENSMUST00000184860 107 ntBASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnrc18Q80WC3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms