Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim62Q80V85 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim62Q80V85 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim62Q80V85 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim62Q80V85 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim62Q80V85 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Mir6349-201ENSMUST00000184059 97 ntBASIC18.65■□□□□ 0.58
Trim62Q80V85 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.65■□□□□ 0.58
Trim62Q80V85 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim62Q80V85 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim62Q80V85 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.65■□□□□ 0.58
Trim62Q80V85 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim62Q80V85 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim62Q80V85 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim62Q80V85 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim62Q80V85 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Trim62Q80V85 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Gm27011-201ENSMUST00000182352 972 ntBASIC18.64■□□□□ 0.57
Trim62Q80V85 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim62Q80V85 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim62Q80V85 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim62Q80V85 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim62Q80V85 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.63■□□□□ 0.57
Trim62Q80V85 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.63■□□□□ 0.57
Trim62Q80V85 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim62Q80V85 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim62Q80V85 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim62Q80V85 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim62Q80V85 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim62Q80V85 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim62Q80V85 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
Trim62Q80V85 Gm13168-201ENSMUST00000121771 632 ntBASIC18.62■□□□□ 0.57
Trim62Q80V85 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Trim62Q80V85 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Trim62Q80V85 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim62Q80V85 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Trim62Q80V85 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim62Q80V85 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.61■□□□□ 0.57
Trim62Q80V85 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Gm10418-201ENSMUST00000100943 576 ntBASIC18.61■□□□□ 0.57
Trim62Q80V85 Gm5643-201ENSMUST00000117081 966 ntBASIC18.61■□□□□ 0.57
Trim62Q80V85 Gm15375-201ENSMUST00000119510 849 ntBASIC18.61■□□□□ 0.57
Trim62Q80V85 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.61■□□□□ 0.57
Trim62Q80V85 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.61■□□□□ 0.57
Trim62Q80V85 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trim62Q80V85 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim62Q80V85 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim62Q80V85 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim62Q80V85 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim62Q80V85 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.6■□□□□ 0.57
Trim62Q80V85 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim62Q80V85 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim62Q80V85 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim62Q80V85 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim62Q80V85 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim62Q80V85 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim62Q80V85 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Trim62Q80V85 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim62Q80V85 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim62Q80V85 Mtag2-201ENSMUST00000058665 714 ntBASIC18.59■□□□□ 0.57
Trim62Q80V85 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim62Q80V85 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim62Q80V85 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms