Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp38Q80UU2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp38Q80UU2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp38Q80UU2 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.98■□□□□ 0.47
Rpp38Q80UU2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp38Q80UU2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Gm11249-201ENSMUST00000117071 859 ntBASIC17.97■□□□□ 0.47
Rpp38Q80UU2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpp38Q80UU2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rpp38Q80UU2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpp38Q80UU2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.95■□□□□ 0.46
Rpp38Q80UU2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpp38Q80UU2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Gm12527-201ENSMUST00000117967 564 ntBASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.93■□□□□ 0.46
Rpp38Q80UU2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms