Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx55Q6ZPL9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Gm14859-201ENSMUST00000117752 357 ntBASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx55Q6ZPL9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ddx55Q6ZPL9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx55Q6ZPL9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx55Q6ZPL9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx55Q6ZPL9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx55Q6ZPL9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx55Q6ZPL9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
Ddx55Q6ZPL9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx55Q6ZPL9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.57■□□□□ 0.88
Ddx55Q6ZPL9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ddx55Q6ZPL9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Gm16061-201ENSMUST00000122167 857 ntBASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.55■□□□□ 0.88
Ddx55Q6ZPL9 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Gm25016-201ENSMUST00000158399 131 ntBASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Gm17661-201ENSMUST00000170317 270 ntBASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx55Q6ZPL9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx55Q6ZPL9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx55Q6ZPL9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx55Q6ZPL9 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.53■□□□□ 0.88
Ddx55Q6ZPL9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx55Q6ZPL9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Ddx55Q6ZPL9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Gm7284-201ENSMUST00000131667 944 ntBASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx55Q6ZPL9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx55Q6ZPL9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx55Q6ZPL9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms