Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CtifQ6PEE2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.18■□□□□ 0.66
CtifQ6PEE2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.18■□□□□ 0.66
CtifQ6PEE2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CtifQ6PEE2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Gm9959-201ENSMUST00000068277 390 ntBASIC19.17■□□□□ 0.66
CtifQ6PEE2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.17■□□□□ 0.66
CtifQ6PEE2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CtifQ6PEE2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Gm10232-201ENSMUST00000089221 720 ntBASIC19.16■□□□□ 0.66
CtifQ6PEE2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CtifQ6PEE2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.15■□□□□ 0.66
CtifQ6PEE2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CtifQ6PEE2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.14■□□□□ 0.66
CtifQ6PEE2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
CtifQ6PEE2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.14■□□□□ 0.65
CtifQ6PEE2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CtifQ6PEE2 Idnk-204ENSMUST00000226010 1898 ntBASIC19.14■□□□□ 0.65
CtifQ6PEE2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CtifQ6PEE2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms