Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Ank2-226ENSMUST00000189368 339 ntBASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Snrnp40Q6PE01 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Snrnp40Q6PE01 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Snrnp40Q6PE01 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Snrnp40Q6PE01 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Snrnp40Q6PE01 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Snrnp40Q6PE01 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Snrnp40Q6PE01 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Snrnp40Q6PE01 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Gm25016-201ENSMUST00000158399 131 ntBASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Snrnp40Q6PE01 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Snrnp40Q6PE01 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Snrnp40Q6PE01 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms