Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cachd1Q6PDJ1 Birc2-201ENSMUST00000054878 378 ntBASIC18.16■□□□□ 0.5
Cachd1Q6PDJ1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cachd1Q6PDJ1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cachd1Q6PDJ1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cachd1Q6PDJ1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cachd1Q6PDJ1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Gm34391-201ENSMUST00000203706 907 ntBASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Gm10138-203ENSMUST00000206952 366 ntBASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cachd1Q6PDJ1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cachd1Q6PDJ1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cachd1Q6PDJ1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cachd1Q6PDJ1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Gm17808-201ENSMUST00000200859 894 ntBASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cachd1Q6PDJ1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Gm11594-201ENSMUST00000122313 162 ntBASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cachd1Q6PDJ1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cachd1Q6PDJ1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Gm14057-201ENSMUST00000120631 482 ntBASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Gm6736-201ENSMUST00000166583 948 ntBASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Gm27389-201ENSMUST00000183622 195 ntBASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Gm37292-201ENSMUST00000192062 758 ntBASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cachd1Q6PDJ1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Gm5264-201ENSMUST00000190584 848 ntBASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cachd1Q6PDJ1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cachd1Q6PDJ1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cachd1Q6PDJ1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cachd1Q6PDJ1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cachd1Q6PDJ1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cachd1Q6PDJ1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.09■□□□□ 0.49
Cachd1Q6PDJ1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms