Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl3Q6P1Y1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Gm11927-201ENSMUST00000118472 759 ntBASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl3Q6P1Y1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl3Q6P1Y1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rtl3Q6P1Y1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rtl3Q6P1Y1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rtl3Q6P1Y1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtl3Q6P1Y1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Zfp783-201ENSMUST00000095946 670 ntBASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl3Q6P1Y1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Gm5643-201ENSMUST00000117081 966 ntBASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Mir6982-201ENSMUST00000184354 68 ntBASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl3Q6P1Y1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl3Q6P1Y1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Gm38285-201ENSMUST00000192928 922 ntBASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl3Q6P1Y1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms