Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Zfp783-201ENSMUST00000095946 670 ntBASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hdac4Q6NZM9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hdac4Q6NZM9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Gm5408-201ENSMUST00000197998 747 ntBASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hdac4Q6NZM9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hdac4Q6NZM9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac4Q6NZM9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac4Q6NZM9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hdac4Q6NZM9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac4Q6NZM9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac4Q6NZM9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hdac4Q6NZM9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Flg-201ENSMUST00000050758 1488 ntBASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hdac4Q6NZM9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hdac4Q6NZM9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Gm10602-201ENSMUST00000098239 609 ntBASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac4Q6NZM9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms