Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Krt42Q6IFX2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Gm27801-201ENSMUST00000184174 223 ntBASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Krt42Q6IFX2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Gm38205-201ENSMUST00000192243 258 ntBASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Krt42Q6IFX2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Gm11421-201ENSMUST00000122124 294 ntBASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Gm43137-201ENSMUST00000198052 594 ntBASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Krt42Q6IFX2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Krt42Q6IFX2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Krt42Q6IFX2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Krt42Q6IFX2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms