Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.48■□□□□ 0.55
Six1Q62231 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.48■□□□□ 0.55
Six1Q62231 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Six1Q62231 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.48■□□□□ 0.55
Six1Q62231 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.48■□□□□ 0.55
Six1Q62231 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Six1Q62231 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six1Q62231 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.47■□□□□ 0.55
Six1Q62231 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.47■□□□□ 0.55
Six1Q62231 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.47■□□□□ 0.55
Six1Q62231 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.47■□□□□ 0.55
Six1Q62231 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six1Q62231 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.46■□□□□ 0.55
Six1Q62231 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Six1Q62231 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.46■□□□□ 0.55
Six1Q62231 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Six1Q62231 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.46■□□□□ 0.55
Six1Q62231 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.46■□□□□ 0.55
Six1Q62231 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.46■□□□□ 0.55
Six1Q62231 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Six1Q62231 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six1Q62231 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Six1Q62231 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.45■□□□□ 0.54
Six1Q62231 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Six1Q62231 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
Six1Q62231 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.45■□□□□ 0.54
Six1Q62231 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.45■□□□□ 0.54
Six1Q62231 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Six1Q62231 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six1Q62231 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.44■□□□□ 0.54
Six1Q62231 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.44■□□□□ 0.54
Six1Q62231 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Six1Q62231 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.44■□□□□ 0.54
Six1Q62231 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.44■□□□□ 0.54
Six1Q62231 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Gm42642-201ENSMUST00000200683 355 ntBASIC18.44■□□□□ 0.54
Six1Q62231 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.44■□□□□ 0.54
Six1Q62231 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.44■□□□□ 0.54
Six1Q62231 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.44■□□□□ 0.54
Six1Q62231 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six1Q62231 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Six1Q62231 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.43■□□□□ 0.54
Six1Q62231 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six1Q62231 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.43■□□□□ 0.54
Six1Q62231 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six1Q62231 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.43■□□□□ 0.54
Six1Q62231 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six1Q62231 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six1Q62231 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Six1Q62231 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.43■□□□□ 0.54
Six1Q62231 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.43■□□□□ 0.54
Six1Q62231 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Six1Q62231 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms