Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Scn9aQ62205 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.36■■□□□ 1.01
Scn9aQ62205 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Scn9aQ62205 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.36■■□□□ 1.01
Scn9aQ62205 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.36■■□□□ 1.01
Scn9aQ62205 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn9aQ62205 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Scn9aQ62205 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.35■■□□□ 1.01
Scn9aQ62205 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Scn9aQ62205 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.35■■□□□ 1.01
Scn9aQ62205 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn9aQ62205 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.34■■□□□ 1.01
Scn9aQ62205 Gm44771-201ENSMUST00000206975 626 ntBASIC21.34■■□□□ 1.01
Scn9aQ62205 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn9aQ62205 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn9aQ62205 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn9aQ62205 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn9aQ62205 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn9aQ62205 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Scn9aQ62205 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.34■■□□□ 1.01
Scn9aQ62205 Gm7370-201ENSMUST00000219471 767 ntBASIC21.34■■□□□ 1.01
Scn9aQ62205 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.34■■□□□ 1.01
Scn9aQ62205 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn9aQ62205 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Scn9aQ62205 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn9aQ62205 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn9aQ62205 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn9aQ62205 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Scn9aQ62205 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn9aQ62205 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.33■■□□□ 1
Scn9aQ62205 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.32■■□□□ 1
Scn9aQ62205 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Gm29518-201ENSMUST00000190858 372 ntBASIC21.32■■□□□ 1
Scn9aQ62205 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.32■■□□□ 1
Scn9aQ62205 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.32■■□□□ 1
Scn9aQ62205 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Scn9aQ62205 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
Scn9aQ62205 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Gm18669-201ENSMUST00000216049 778 ntBASIC21.32■■□□□ 1
Scn9aQ62205 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Scn9aQ62205 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.32■■□□□ 1
Scn9aQ62205 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn9aQ62205 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn9aQ62205 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn9aQ62205 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.31■■□□□ 1
Scn9aQ62205 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn9aQ62205 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn9aQ62205 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.31■■□□□ 1
Scn9aQ62205 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn9aQ62205 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.31■■□□□ 1
Scn9aQ62205 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn9aQ62205 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn9aQ62205 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn9aQ62205 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn9aQ62205 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn9aQ62205 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn9aQ62205 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.29■■□□□ 1
Scn9aQ62205 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn9aQ62205 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scn9aQ62205 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scn9aQ62205 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 Mir1668-201ENSMUST00000184114 107 ntBASIC21.28■■□□□ 1
Scn9aQ62205 Gm4974-201ENSMUST00000209974 875 ntBASIC21.28■■□□□ 1
Scn9aQ62205 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.28■■□□□ 1
Scn9aQ62205 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn9aQ62205 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.27■■□□□ 1
Scn9aQ62205 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms