Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Foxn1Q61575 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxn1Q61575 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxn1Q61575 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxn1Q61575 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.59■□□□□ 0.89
Foxn1Q61575 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxn1Q61575 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.59■□□□□ 0.89
Foxn1Q61575 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxn1Q61575 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Foxn1Q61575 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.58■□□□□ 0.89
Foxn1Q61575 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 Gm27357-201ENSMUST00000183754 135 ntBASIC20.58■□□□□ 0.89
Foxn1Q61575 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxn1Q61575 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Foxn1Q61575 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.58■□□□□ 0.89
Foxn1Q61575 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn1Q61575 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn1Q61575 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn1Q61575 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxn1Q61575 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.57■□□□□ 0.88
Foxn1Q61575 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.57■□□□□ 0.88
Foxn1Q61575 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.57■□□□□ 0.88
Foxn1Q61575 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Foxn1Q61575 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Foxn1Q61575 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.56■□□□□ 0.88
Foxn1Q61575 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.56■□□□□ 0.88
Foxn1Q61575 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Foxn1Q61575 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxn1Q61575 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn1Q61575 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Foxn1Q61575 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn1Q61575 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn1Q61575 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn1Q61575 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn1Q61575 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.55■□□□□ 0.88
Foxn1Q61575 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Foxn1Q61575 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxn1Q61575 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.54■□□□□ 0.88
Foxn1Q61575 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.54■□□□□ 0.88
Foxn1Q61575 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.54■□□□□ 0.88
Foxn1Q61575 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxn1Q61575 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Mir2861-201ENSMUST00000175539 82 ntBASIC20.53■□□□□ 0.88
Foxn1Q61575 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Mir1668-201ENSMUST00000184114 107 ntBASIC20.53■□□□□ 0.88
Foxn1Q61575 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Foxn1Q61575 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxn1Q61575 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.52■□□□□ 0.88
Foxn1Q61575 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn1Q61575 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn1Q61575 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn1Q61575 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.52■□□□□ 0.88
Foxn1Q61575 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Foxn1Q61575 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxn1Q61575 Gm28659-201ENSMUST00000188013 759 ntBASIC20.52■□□□□ 0.88
Foxn1Q61575 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.52■□□□□ 0.88
Foxn1Q61575 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms