Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.89■□□□□ 0.45
Col12a1Q60847 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col12a1Q60847 Gm27389-201ENSMUST00000183622 195 ntBASIC17.89■□□□□ 0.45
Col12a1Q60847 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Gm43347-201ENSMUST00000200226 580 ntBASIC17.89■□□□□ 0.45
Col12a1Q60847 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.89■□□□□ 0.45
Col12a1Q60847 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Col12a1Q60847 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Col12a1Q60847 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col12a1Q60847 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Gm13474-201ENSMUST00000122466 815 ntBASIC17.88■□□□□ 0.45
Col12a1Q60847 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col12a1Q60847 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.88■□□□□ 0.45
Col12a1Q60847 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.88■□□□□ 0.45
Col12a1Q60847 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col12a1Q60847 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col12a1Q60847 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.87■□□□□ 0.45
Col12a1Q60847 Gm28659-201ENSMUST00000188013 759 ntBASIC17.87■□□□□ 0.45
Col12a1Q60847 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Col12a1Q60847 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.87■□□□□ 0.45
Col12a1Q60847 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.87■□□□□ 0.45
Col12a1Q60847 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Col12a1Q60847 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col12a1Q60847 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.86■□□□□ 0.45
Col12a1Q60847 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Col12a1Q60847 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Col12a1Q60847 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Col12a1Q60847 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.86■□□□□ 0.45
Col12a1Q60847 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col12a1Q60847 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col12a1Q60847 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.85■□□□□ 0.45
Col12a1Q60847 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Col12a1Q60847 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.85■□□□□ 0.45
Col12a1Q60847 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col12a1Q60847 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col12a1Q60847 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.85■□□□□ 0.45
Col12a1Q60847 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Col12a1Q60847 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Col12a1Q60847 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col12a1Q60847 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.84■□□□□ 0.45
Col12a1Q60847 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col12a1Q60847 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.83■□□□□ 0.45
Col12a1Q60847 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Col12a1Q60847 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col12a1Q60847 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Col12a1Q60847 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col12a1Q60847 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms