Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mkrn3Q60764 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mkrn3Q60764 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mkrn3Q60764 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mkrn3Q60764 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mkrn3Q60764 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mkrn3Q60764 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mkrn3Q60764 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Gm2399-201ENSMUST00000104944 225 ntBASIC20.07■□□□□ 0.8
Mkrn3Q60764 Gm22325-201ENSMUST00000158904 308 ntBASIC20.07■□□□□ 0.8
Mkrn3Q60764 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.07■□□□□ 0.8
Mkrn3Q60764 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.07■□□□□ 0.8
Mkrn3Q60764 BC021767-201ENSMUST00000126387 1716 ntBASIC20.07■□□□□ 0.8
Mkrn3Q60764 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mkrn3Q60764 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Mkrn3Q60764 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.06■□□□□ 0.8
Mkrn3Q60764 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.05■□□□□ 0.8
Mkrn3Q60764 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.05■□□□□ 0.8
Mkrn3Q60764 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mkrn3Q60764 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.04■□□□□ 0.8
Mkrn3Q60764 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Mkrn3Q60764 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.03■□□□□ 0.8
Mkrn3Q60764 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.03■□□□□ 0.8
Mkrn3Q60764 Gm5643-201ENSMUST00000117081 966 ntBASIC20.03■□□□□ 0.8
Mkrn3Q60764 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.03■□□□□ 0.8
Mkrn3Q60764 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.03■□□□□ 0.8
Mkrn3Q60764 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mkrn3Q60764 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Mkrn3Q60764 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mkrn3Q60764 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mkrn3Q60764 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mkrn3Q60764 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mkrn3Q60764 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mkrn3Q60764 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mkrn3Q60764 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mkrn3Q60764 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mkrn3Q60764 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.01■□□□□ 0.79
Mkrn3Q60764 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.01■□□□□ 0.79
Mkrn3Q60764 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mkrn3Q60764 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mkrn3Q60764 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mkrn3Q60764 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mkrn3Q60764 Gm25007-201ENSMUST00000083808 133 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms