Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom1Q5SX79 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Mir5122-201ENSMUST00000175004 89 ntBASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.13■□□□□ 0.65
Shroom1Q5SX79 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Gm38285-201ENSMUST00000192928 922 ntBASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom1Q5SX79 Grk6-206ENSMUST00000224995 2971 ntBASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom1Q5SX79 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Gm15565-201ENSMUST00000118890 427 ntBASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Rarb-207ENSMUST00000225921 2756 ntBASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom1Q5SX79 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Mtag2-201ENSMUST00000058665 714 ntBASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom1Q5SX79 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shroom1Q5SX79 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Shroom1Q5SX79 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.08■□□□□ 0.65
Shroom1Q5SX79 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.08■□□□□ 0.65
Shroom1Q5SX79 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom1Q5SX79 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Gm15375-201ENSMUST00000119510 849 ntBASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Gm11643-201ENSMUST00000119578 864 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms