Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.61■■□□□ 1.05
Vps54Q5SPW0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps54Q5SPW0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vps54Q5SPW0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Mir2861-201ENSMUST00000175539 82 ntBASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Vps54Q5SPW0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Gm42545-201ENSMUST00000202755 922 ntBASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps54Q5SPW0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Gm15378-201ENSMUST00000121894 207 ntBASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps54Q5SPW0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps54Q5SPW0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Gm18025-201ENSMUST00000221733 862 ntBASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps54Q5SPW0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps54Q5SPW0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps54Q5SPW0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps54Q5SPW0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps54Q5SPW0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms