Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Gm40848-201ENSMUST00000221998 324 ntBASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav8d-1Q5R1H8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav8d-1Q5R1H8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav8d-1Q5R1H8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.72□□□□□ -0.05
Trav8d-1Q5R1H8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trav8d-1Q5R1H8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav8d-1Q5R1H8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav8d-1Q5R1H8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms