Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-3Q5R1E6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Nespas-201ENSMUST00000143738 1083 ntBASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-3Q5R1E6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-3Q5R1E6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-3Q5R1E6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-3Q5R1E6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-3Q5R1E6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-3Q5R1E6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-3Q5R1E6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-3Q5R1E6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-3Q5R1E6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Gm7514-201ENSMUST00000209475 934 ntBASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Trav6-3Q5R1E6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms