Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Gm27389-201ENSMUST00000183622 195 ntBASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8d-2Q5R1B6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav8d-2Q5R1B6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.58■□□□□ 0.41
Trav8d-2Q5R1B6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Gm27704-201ENSMUST00000185094 107 ntBASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.58■□□□□ 0.4
Trav8d-2Q5R1B6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav8d-2Q5R1B6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Gm5587-201ENSMUST00000206270 674 ntBASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8d-2Q5R1B6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Gm21559-201ENSMUST00000220638 855 ntBASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Gm8587-201ENSMUST00000076538 843 ntBASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trav8d-2Q5R1B6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Gm9013-201ENSMUST00000132939 882 ntBASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-2Q5R1B6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms