Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Scarf1Q5ND28 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scarf1Q5ND28 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scarf1Q5ND28 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Scarf1Q5ND28 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Gm43416-201ENSMUST00000201916 1015 ntBASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.67■□□□□ 0.74
Scarf1Q5ND28 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.67■□□□□ 0.74
Scarf1Q5ND28 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scarf1Q5ND28 Grk6-206ENSMUST00000224995 2971 ntBASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Mir6349-201ENSMUST00000184059 97 ntBASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Gm42545-201ENSMUST00000202755 922 ntBASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Gm18025-201ENSMUST00000221733 862 ntBASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.65■□□□□ 0.74
Scarf1Q5ND28 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scarf1Q5ND28 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Scarf1Q5ND28 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scarf1Q5ND28 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 184 ms