Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clhc1Q5M6W3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clhc1Q5M6W3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clhc1Q5M6W3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clhc1Q5M6W3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clhc1Q5M6W3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clhc1Q5M6W3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clhc1Q5M6W3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.33■□□□□ 0.37
Clhc1Q5M6W3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clhc1Q5M6W3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clhc1Q5M6W3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.33■□□□□ 0.36
Clhc1Q5M6W3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clhc1Q5M6W3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms