Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gm14494-201ENSMUST00000118786 435 ntBASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Il17rd-202ENSMUST00000223942 2186 ntBASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.81□□□□□ -0.68
Herc2Q4U2R1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Herc2Q4U2R1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Herc2Q4U2R1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Mir770-201ENSMUST00000103252 94 ntBASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Psmb5-202ENSMUST00000227257 622 ntBASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Herc2Q4U2R1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms