Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Gm10138-203ENSMUST00000206952 366 ntBASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ckap2Q3V1H1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ckap2Q3V1H1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Mir6349-201ENSMUST00000184059 97 ntBASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ckap2Q3V1H1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Trmt13-210ENSMUST00000198454 880 ntBASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ckap2Q3V1H1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ckap2Q3V1H1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ckap2Q3V1H1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ckap2Q3V1H1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Gm13158-201ENSMUST00000122007 736 ntBASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Ckap2Q3V1H1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Idnk-204ENSMUST00000226010 1898 ntBASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ckap2Q3V1H1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Gm15375-201ENSMUST00000119510 849 ntBASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms