Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm12933-201ENSMUST00000120203 872 ntBASIC18.56■□□□□ 0.56
Trim80Q3V061 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim80Q3V061 Gm27011-201ENSMUST00000182352 972 ntBASIC18.56■□□□□ 0.56
Trim80Q3V061 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim80Q3V061 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim80Q3V061 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim80Q3V061 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trim80Q3V061 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Trim80Q3V061 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim80Q3V061 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim80Q3V061 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim80Q3V061 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Gm10602-201ENSMUST00000098239 609 ntBASIC18.54■□□□□ 0.56
Trim80Q3V061 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trim80Q3V061 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim80Q3V061 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.53■□□□□ 0.56
Trim80Q3V061 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.53■□□□□ 0.56
Trim80Q3V061 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim80Q3V061 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim80Q3V061 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim80Q3V061 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Trim80Q3V061 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.53■□□□□ 0.56
Trim80Q3V061 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.52■□□□□ 0.56
Trim80Q3V061 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.52■□□□□ 0.56
Trim80Q3V061 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trim80Q3V061 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim80Q3V061 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Trim80Q3V061 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.52■□□□□ 0.56
Trim80Q3V061 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.52■□□□□ 0.56
Trim80Q3V061 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.52■□□□□ 0.56
Trim80Q3V061 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.52■□□□□ 0.56
Trim80Q3V061 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim80Q3V061 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.52■□□□□ 0.56
Trim80Q3V061 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim80Q3V061 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim80Q3V061 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim80Q3V061 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim80Q3V061 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trim80Q3V061 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.51■□□□□ 0.55
Trim80Q3V061 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim80Q3V061 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim80Q3V061 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.51■□□□□ 0.55
Trim80Q3V061 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim80Q3V061 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms