Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim40Q3UWA4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim40Q3UWA4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim40Q3UWA4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim40Q3UWA4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.87■□□□□ 0.29
Trim40Q3UWA4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Gm13241-201ENSMUST00000094493 780 ntBASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim40Q3UWA4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Tgds-204ENSMUST00000228543 1594 ntBASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim40Q3UWA4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim40Q3UWA4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.85■□□□□ 0.29
Trim40Q3UWA4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms