Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf223Q3UV31 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf223Q3UV31 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Gm12382-201ENSMUST00000122005 922 ntBASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Mir5122-201ENSMUST00000175004 89 ntBASIC17.46■□□□□ 0.39
Rnf223Q3UV31 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf223Q3UV31 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Gm37055-201ENSMUST00000191866 133 ntBASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf223Q3UV31 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf223Q3UV31 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Fst-202ENSMUST00000223640 2612 ntBASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf223Q3UV31 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Mir7071-201ENSMUST00000184847 69 ntBASIC17.42■□□□□ 0.38
Rnf223Q3UV31 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms