Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsmem1Q3UQS2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsmem1Q3UQS2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsmem1Q3UQS2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsmem1Q3UQS2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lsmem1Q3UQS2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsmem1Q3UQS2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Mir2861-201ENSMUST00000175539 82 ntBASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Gm20760-201ENSMUST00000179197 648 ntBASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsmem1Q3UQS2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.24■□□□□ 0.51
Lsmem1Q3UQS2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Gm5643-201ENSMUST00000117081 966 ntBASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Lsmem1Q3UQS2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Mir6349-201ENSMUST00000184059 97 ntBASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsmem1Q3UQS2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Gm15375-201ENSMUST00000119510 849 ntBASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lsmem1Q3UQS2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms