Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.73■□□□□ 0.27
Tnrc6aQ3UHK8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnrc6aQ3UHK8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.73■□□□□ 0.27
Tnrc6aQ3UHK8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnrc6aQ3UHK8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnrc6aQ3UHK8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnrc6aQ3UHK8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnrc6aQ3UHK8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnrc6aQ3UHK8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Gm18959-201ENSMUST00000208954 655 ntBASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnrc6aQ3UHK8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tnrc6aQ3UHK8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnrc6aQ3UHK8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Gm7367-201ENSMUST00000057611 492 ntBASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tnrc6aQ3UHK8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6aQ3UHK8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.65■□□□□ 0.26
Tnrc6aQ3UHK8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.65■□□□□ 0.26
Tnrc6aQ3UHK8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tnrc6aQ3UHK8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms