Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf44Q3UHJ8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.42■□□□□ 0.38
Rnf44Q3UHJ8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf44Q3UHJ8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf44Q3UHJ8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf44Q3UHJ8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Gm38285-201ENSMUST00000192928 922 ntBASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Zfp783-201ENSMUST00000095946 670 ntBASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf44Q3UHJ8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Gm11927-201ENSMUST00000118472 759 ntBASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf44Q3UHJ8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Tgds-204ENSMUST00000228543 1594 ntBASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Gm11249-201ENSMUST00000117071 859 ntBASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf44Q3UHJ8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf44Q3UHJ8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms