Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Gm10418-201ENSMUST00000100943 576 ntBASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Gm7213-201ENSMUST00000215977 950 ntBASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Gm15794-201ENSMUST00000120182 631 ntBASIC16.67■□□□□ 0.26
Spg11Q3UHA3 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Gm2756-201ENSMUST00000195851 400 ntBASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Gm2213-201ENSMUST00000197485 688 ntBASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Gm5364-201ENSMUST00000216789 889 ntBASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Rps4l-201ENSMUST00000071745 943 ntBASIC16.67■□□□□ 0.26
Spg11Q3UHA3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Spg11Q3UHA3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Spg11Q3UHA3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.65■□□□□ 0.26
Spg11Q3UHA3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Gm8000-201ENSMUST00000188378 592 ntBASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Spg11Q3UHA3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Spg11Q3UHA3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.64■□□□□ 0.25
Spg11Q3UHA3 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.64■□□□□ 0.25
Spg11Q3UHA3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Spg11Q3UHA3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Gm10175-201ENSMUST00000086013 645 ntBASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms