Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Carmil3Q3UFQ8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Carmil3Q3UFQ8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Mir2861-201ENSMUST00000175539 82 ntBASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Carmil3Q3UFQ8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Carmil3Q3UFQ8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Carmil3Q3UFQ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Carmil3Q3UFQ8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Carmil3Q3UFQ8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Carmil3Q3UFQ8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Carmil3Q3UFQ8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Carmil3Q3UFQ8 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms