Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.21■□□□□ 0.35
Xrra1Q3U3V8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Xrra1Q3U3V8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Xrra1Q3U3V8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Xrra1Q3U3V8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Gm4968-201ENSMUST00000071458 858 ntBASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Xrra1Q3U3V8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.16■□□□□ 0.34
Xrra1Q3U3V8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xrra1Q3U3V8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.15■□□□□ 0.34
Xrra1Q3U3V8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xrra1Q3U3V8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.15■□□□□ 0.34
Xrra1Q3U3V8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Xrra1Q3U3V8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.15■□□□□ 0.34
Xrra1Q3U3V8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms