Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lins1Q3U1D0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.47■■□□□ 1.03
Lins1Q3U1D0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lins1Q3U1D0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Lins1Q3U1D0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Gm15375-201ENSMUST00000119510 849 ntBASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lins1Q3U1D0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Gm11643-201ENSMUST00000119578 864 ntBASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Gm18025-201ENSMUST00000221733 862 ntBASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lins1Q3U1D0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Gm5417-201ENSMUST00000079706 384 ntBASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lins1Q3U1D0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.42■■□□□ 1.02
Lins1Q3U1D0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Gm9987-201ENSMUST00000069768 567 ntBASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lins1Q3U1D0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Gm42545-201ENSMUST00000202755 922 ntBASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lins1Q3U1D0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Gm21814-202ENSMUST00000203277 873 ntBASIC21.4■■□□□ 1.02
Lins1Q3U1D0 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.4■■□□□ 1.02
Lins1Q3U1D0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lins1Q3U1D0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lins1Q3U1D0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lins1Q3U1D0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms