Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.35■□□□□ 0.05
Fndc4Q3TR08 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fndc4Q3TR08 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fndc4Q3TR08 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Fndc4Q3TR08 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fndc4Q3TR08 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Fndc4Q3TR08 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Fndc4Q3TR08 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gm38205-201ENSMUST00000192243 258 ntBASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fndc4Q3TR08 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Fndc4Q3TR08 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Fndc4Q3TR08 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fndc4Q3TR08 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Gm9988-201ENSMUST00000069786 435 ntBASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Fndc4Q3TR08 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Fndc4Q3TR08 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.3■□□□□ 0.04
Fndc4Q3TR08 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms