Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Khdc4Q3TCX3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Khdc4Q3TCX3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Gm11249-201ENSMUST00000117071 859 ntBASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Khdc4Q3TCX3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Gm2399-201ENSMUST00000104944 225 ntBASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Khdc4Q3TCX3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Khdc4Q3TCX3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Khdc4Q3TCX3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Khdc4Q3TCX3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Khdc4Q3TCX3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Khdc4Q3TCX3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Gm18666-201ENSMUST00000190039 958 ntBASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Khdc4Q3TCX3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms