Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Gm10138-203ENSMUST00000206952 366 ntBASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Gm5417-201ENSMUST00000079706 384 ntBASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pkd1l3Q2EG98 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Gm6433-201ENSMUST00000118634 875 ntBASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Gm7977-201ENSMUST00000193787 748 ntBASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pkd1l3Q2EG98 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Gm13836-201ENSMUST00000121159 501 ntBASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Gm38285-201ENSMUST00000192928 922 ntBASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 BC021767-201ENSMUST00000126387 1716 ntBASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pkd1l3Q2EG98 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pkd1l3Q2EG98 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pkd1l3Q2EG98 Mir6349-201ENSMUST00000184059 97 ntBASIC16.12■□□□□ 0.17
Pkd1l3Q2EG98 Gm37292-201ENSMUST00000192062 758 ntBASIC16.12■□□□□ 0.17
Pkd1l3Q2EG98 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.12■□□□□ 0.17
Pkd1l3Q2EG98 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pkd1l3Q2EG98 Gm21814-202ENSMUST00000203277 873 ntBASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Gm12382-201ENSMUST00000122005 922 ntBASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pkd1l3Q2EG98 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms