Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx3-2P97503 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.97■□□□□ 0.31
Nkx3-2P97503 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx3-2P97503 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.96■□□□□ 0.31
Nkx3-2P97503 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Nkx3-2P97503 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.96■□□□□ 0.31
Nkx3-2P97503 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.96■□□□□ 0.31
Nkx3-2P97503 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx3-2P97503 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx3-2P97503 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.95■□□□□ 0.3
Nkx3-2P97503 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.95■□□□□ 0.3
Nkx3-2P97503 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx3-2P97503 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Gm11927-201ENSMUST00000118472 759 ntBASIC16.94■□□□□ 0.3
Nkx3-2P97503 Gm15378-201ENSMUST00000121894 207 ntBASIC16.94■□□□□ 0.3
Nkx3-2P97503 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nkx3-2P97503 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.94■□□□□ 0.3
Nkx3-2P97503 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx3-2P97503 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx3-2P97503 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.93■□□□□ 0.3
Nkx3-2P97503 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.93■□□□□ 0.3
Nkx3-2P97503 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.93■□□□□ 0.3
Nkx3-2P97503 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms