Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cdh6P97326 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cdh6P97326 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Gm11927-201ENSMUST00000118472 759 ntBASIC18.25■□□□□ 0.51
Cdh6P97326 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdh6P97326 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.25■□□□□ 0.51
Cdh6P97326 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.25■□□□□ 0.51
Cdh6P97326 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdh6P97326 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdh6P97326 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh6P97326 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh6P97326 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh6P97326 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh6P97326 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Fst-202ENSMUST00000223640 2612 ntBASIC18.23■□□□□ 0.51
Cdh6P97326 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh6P97326 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Cdh6P97326 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.22■□□□□ 0.51
Cdh6P97326 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdh6P97326 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.22■□□□□ 0.51
Cdh6P97326 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh6P97326 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cdh6P97326 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh6P97326 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.21■□□□□ 0.51
Cdh6P97326 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh6P97326 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh6P97326 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdh6P97326 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdh6P97326 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.21■□□□□ 0.5
Cdh6P97326 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.2■□□□□ 0.5
Cdh6P97326 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh6P97326 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdh6P97326 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdh6P97326 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Gm12527-201ENSMUST00000117967 564 ntBASIC18.19■□□□□ 0.5
Cdh6P97326 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cdh6P97326 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.19■□□□□ 0.5
Cdh6P97326 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.19■□□□□ 0.5
Cdh6P97326 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms