Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim43cP86449 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim43cP86449 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim43cP86449 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim43cP86449 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43cP86449 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43cP86449 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Trim43cP86449 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43cP86449 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.6■□□□□ 0.73
Trim43cP86449 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43cP86449 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim43cP86449 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim43cP86449 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim43cP86449 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Gm12441-201ENSMUST00000121806 588 ntBASIC19.59■□□□□ 0.73
Trim43cP86449 Gm20049-201ENSMUST00000219950 730 ntBASIC19.59■□□□□ 0.73
Trim43cP86449 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim43cP86449 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim43cP86449 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim43cP86449 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim43cP86449 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim43cP86449 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.58■□□□□ 0.72
Trim43cP86449 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Trim43cP86449 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43cP86449 Mtag2-201ENSMUST00000058665 714 ntBASIC19.58■□□□□ 0.72
Trim43cP86449 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43cP86449 Flg-201ENSMUST00000050758 1488 ntBASIC19.58■□□□□ 0.72
Trim43cP86449 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43cP86449 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43cP86449 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim43cP86449 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Trim43cP86449 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Gm11249-201ENSMUST00000117071 859 ntBASIC19.57■□□□□ 0.72
Trim43cP86449 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Trim43cP86449 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43cP86449 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.56■□□□□ 0.72
Trim43cP86449 Gm29257-201ENSMUST00000186115 639 ntBASIC19.56■□□□□ 0.72
Trim43cP86449 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim43cP86449 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43cP86449 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim43cP86449 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Gm12896-201ENSMUST00000118430 226 ntBASIC19.55■□□□□ 0.72
Trim43cP86449 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim43cP86449 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim43cP86449 Gm2559-201ENSMUST00000201323 363 ntBASIC19.55■□□□□ 0.72
Trim43cP86449 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.55■□□□□ 0.72
Trim43cP86449 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43cP86449 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim43cP86449 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Trim43cP86449 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim43cP86449 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim43cP86449 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trim43cP86449 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.54■□□□□ 0.72
Trim43cP86449 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms